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Bristlecone Module

Functions and values

Function or value Description

fitDendro engine endCondition system plant

Full Usage: fitDendro engine endCondition system plant

Parameters:
Returns: EstimationResult An estimation result for the given plant, model and fitting method (engine)

Fit a model to plant growth time-series. The plant individual's growth data is always labelled as `x`.

engine : EstimationEngine<float, float>

A configured estimation engine

endCondition : EndCondition<float>

The end condition to apply to optimisation

system : ModelSystem

The compiled model system for analysis

plant : PlantIndividual

A plant individual

Returns: EstimationResult

An estimation result for the given plant, model and fitting method (engine)

fromDendro plant

Full Usage: fromDendro plant

Parameters:
Returns: Map<ShortCode, TimeSeries<float>> A coded map of time-series data for model-fitting

Lower time-series data from a plant individual type into basic time-series that may be used for model-fitting

plant : PlantIndividual

A plant individual

Returns: Map<ShortCode, TimeSeries<float>>

A coded map of time-series data for model-fitting

oneStepAheadDendro engine system plant preTransform estimate

Full Usage: oneStepAheadDendro engine system plant preTransform estimate

Parameters:
Returns: CodedMap<FitSeries * NStepStatistics>

Perform n-step-ahead computation on the hypothesis and plant. The plant individual's growth data is always labelled as `x`.

engine : EstimationEngine<float, float>

system : ModelSystem

plant : PlantIndividual

preTransform : CodedMap<TimeSeries<float>> -> CodedMap<TimeSeries<float>>

estimate : Pool

Returns: CodedMap<FitSeries * NStepStatistics>

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